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Table 3 Summary of results of individual EWAS. Number of differentially methylated probes (DMPs) and differentially variable probes (DVPs) identified in individual EWAS at p < 0.05 and FDR < 0.05, where applicable

From: Exposure to arsenic at different life-stages and DNA methylation meta-analysis in buccal cells and leukocytes

 

Adjusted for sex, age, and smoking status

Adjusted for cell type proportions, age, and smoking status

 

All probes

Common probes a

All probes

Common probes a

DMPs

p < 0.05

p < 0.05

p < 0.05

p < 0.05

Chile, PBMCs

24,853

13,558

46,946

23,116

Chile, buccal cells

21,745

11,896

42,563

21,336

Bangladesh, 450 K

51,839

47,876

19,913

18,301

Bangladesh, 850 K

10,422

5919

14,935

7954

DVPs

p < 0.05

FDR < 0.05

p < 0.05

FDR < 0.05

p < 0.05

FDR < 0.05

p < 0.05

FDR < 0.05

Chile, PBMCs

34,906

4

19,094

3

43,813

5

23,487

3

Chile buccal, cells

36,131

5

20,659

2

35,928

7

20,735

4

Bangladesh, 450 K

22,741

5

20,925

4

18,318

3

16,904

2

Bangladesh, 850 K

33,921

47

17,646

17

53,875

51

26,155

24

  1. DMP differentially methylated position, DVP differentially variable position. a Limiting probes to 377,351 included in all four EWAS